{
 "cells": [
  {
   "cell_type": "markdown",
   "id": "installation-title",
   "metadata": {},
   "source": [
    "# Installation\n",
    "CellDyc requires Python 3.9 or later. We recommend installing CellDyc in a separate conda environment."
   ]
  },
  {
   "cell_type": "markdown",
   "id": "conda-environment",
   "metadata": {},
   "source": [
    "### Create a fresh conda environment\n",
    "\n",
    "```bash\n",
    "conda create -n celldyc python=3.12 -y\n",
    "conda activate celldyc\n",
    "```"
   ]
  },
  {
   "cell_type": "markdown",
   "id": "install-celldyc",
   "metadata": {},
   "source": [
    "**Install CellDyc from GitHub using:**\n",
    "\n",
    "```bash\n",
    "pip install \"git+https://github.com/hsinring/celldyc.git\"\n",
    "```\n",
    "**or:**\n",
    "```bash\n",
    "git clone https://github.com/hsinring/celldyc.git\n",
    "cd celldyc\n",
    "pip install .\n",
    "```\n",
    "\n",
    "**Install CellDyc from PyPI using:**\n",
    "```bash\n",
    "# celldyc is not available on PyPI yet, we will upload the package as soon as possible\n",
    "#pip install celldyc\n",
    "```"
   ]
  }
 ],
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